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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs77746509 chr8:60123325 G/A PRHOXNB chr13:28552243-28562774:- 0.65 9.12 2.3E-12 Box Plot
ACC rs77770996 chr4:180597082 C/T GC chr4:72607410-72669758:- 0.82 7.53 7.21E-10 Box Plot
ACC rs77792176 chr1:201900496 C/T TM4SF5 chr17:4675179-4686508:+ 0.93 8.08 9.37E-11 Box Plot
ACC rs77795506 chr11:8473283 A/T PRHOXNB chr13:28552243-28562774:- 0.63 7.53 7.08E-10 Box Plot
ACC rs77800019 chr6:62268572 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs77816805 chr8:112744776 T/C KRT6C chr12:52862300-52867569:- 0.7 8.16 7.09E-11 Box Plot
ACC rs77867705 chr9:130730092 G/A PRAMEF16 chr1:13495254-13498260:+ 0.53 7.59 5.72E-10 Box Plot
ACC rs77882568 chr6:62281543 C/A PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs77962848 chr1:209704358 T/C PRHOXNB chr13:28552243-28562774:- 0.7 9.17 1.91E-12 Box Plot
ACC rs78002806 chr7:17269046 A/C TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs78032239 chr2:125075680 G/A REG1P chr2:79362629-79365553:- 0.93 7.64 4.66E-10 Box Plot
ACC rs78055292 chr6:62304686 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs78082508 chr17:32523777 C/T TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs78093441 chr8:43372298 C/T PRHOXNB chr13:28552243-28562774:- 0.66 8.08 9.61E-11 Box Plot
ACC rs7815869 chr8:112844394 A/C KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot